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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7288995 chr22:26668175 A/C ZMAT5 chr22:30126945-30163000:- 0.47 6.41 3.47E-10 Box Plot
THCA rs7288995 chr22:26668175 A/C ZNF280B chr22:22838767-22863472:- 0.58 6.01 3.64E-9 Box Plot
THCA rs7288995 chr22:26668175 A/C ZNF74 chr22:20748405-20762751:+ 0.7 6.27 8.28E-10 Box Plot
THCA rs7289104 chr22:23977513 A/G IGLL3 chr22:25713888-25716191:+ 0.59 8.76 3.3E-17 Box Plot
THCA rs7289879 chr22:24001837 T/G IGLL3 chr22:25713888-25716191:+ 0.66 9.56 6.01E-20 Box Plot
THCA rs7291110 chr22:24045321 C/T IGLL3 chr22:25713888-25716191:+ 0.69 9.89 4.3E-21 Box Plot
THCA rs7292724 chr22:23970044 G/A IGLL3 chr22:25713888-25716191:+ 0.69 9.21 1.04E-18 Box Plot
THCA rs7292741 chr22:23970086 G/A IGLL3 chr22:25713888-25716191:+ 0.66 11.51 3.15E-27 Box Plot
THCA rs7293302 chr5:46131179 G/C LOC647121 chr1:121260910-121313686:+ 0.37 7.93 1.52E-14 Box Plot
THCA rs7293315 chr5:46206902 A/G LOC647121 chr1:121260910-121313686:+ 0.37 8.04 7.34E-15 Box Plot
THCA rs7293317 chr5:46207079 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.14 3.46E-15 Box Plot
THCA rs7293321 chr5:46207027 G/T LOC647121 chr1:121260910-121313686:+ 0.37 7.98 1.13E-14 Box Plot
THCA rs7293337 chr5:46203497 T/G LOC647121 chr1:121260910-121313686:+ 0.38 8.14 3.46E-15 Box Plot
THCA rs7293426 chr5:49552004 T/A LOC647121 chr1:121260910-121313686:+ -0.36 -7.64 1.17E-13 Box Plot
THCA rs7293482 chr5:46004086 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.13 3.61E-15 Box Plot